研究業績

論文リスト

2024
2023
2022

2024年

  1. Ueno, Y., Schmidt, J. A., Johnson, M. S., Zang, X., Gilbert, A., Kurokawa, H., Usui, T., and Aoki, S. (2024). Synthesis of 13C -depleted organic matter from CO in a reducing early Martian atmosphere. Nature Geoscience. 10.1038/s41561-024-01443-z
  2. Gagrani, P., Blanco, V., Smith, E., and Baum, D. (2024). Polyhedral geometry and combinatorics of an autocatalytic ecosystem. Journal of Mathematical Chemistry, 62, 1012-1078.
  3. Otsubo, Y., Otani, K., Li, A., Adachi, K., Kong, S., Kitadai, N., Hashizume, D., Nakamura, R., Fujita, T., Miyauchi, M., and Yamaguchi, A. (2024). Hydrothermal electrochemical flow reactor to independently control temperature, pressure, and potential for manganese oxide electrodeposition. Ceramics International, 50, 5992-6000.
  4. Smith, E. (2024). Beyond fitness: The information imparted in population states by selection throughout lifecycles. Theor Popul Biol, 157, 86-117.
  5. Watanabe, Y., and Ozaki, K. (2024). Relative Abundances of CO2, CO, and CH4 in Atmospheres of Earth-like Lifeless Planets. The Astrophysical Journal, 961.
  6. Watanabe, Y., Ozaki, K., and Tajika, E. (2024). Marine Phosphate Level During the Archean Constrained by the Global Redox Budget. Geophysical Research Letters, 51.
  7. Yamaguchi, A., Kubo, R., El Aisnada, A. N., Adachi, K., Lee, J.-E., Kitadai, N., Hashizume, D., Nakamura, R., and Miyauchi, M. (2024). Temperature and Pressure Dependence of Hydrothermal Electrodeposition of Molybdenum Sulfide. ACS Applied Energy Materials, 7, 2593-2599.

2023年

  1. Aoki, S., Shiobara, K., Yoshida, N., Trompet, L., Yoshida, T., Terada, N., Nakagawa, H., Liuzzi, G., Vandaele, A. C., Thomas, I. R., Villanueva, G. L., Lopez-Valverde, M. A., Brines, A., Patel, M. R., Faggi, S., Daerden, F., Erwin, J. T., Ristic, B., Bellucci, G., Lopez-Moreno, J. J., Kurokawa, H., and Ueno, Y. (2023). Depletion of 13C in CO in the Atmosphere of Mars Suggested by ExoMars-TGO/ NOMAD Observations. The Planetary Science Journal, 4.
  2. Baum, D. A., Peng, Z., Dolson, E., Smith, E., Plum, A. M., and Gagrani, P. (2023). The ecology-evolution continuum and the origin of life. Journal of the Royal Society Interface, 20, 20230346.
  3. Chen, C., Yi, R., Igisu, M., Sakaguchi, C., Afrin, R., Potiszil, C., Kunihiro, T., Kobayashi, K., Nakamura, E., Ueno, Y., Antunes, A., Wang, A., Chandru, K., Hao, J., and Jia, T. Z. (2023). Spectroscopic and Biophysical Methods to Determine Differential Salt-Uptake by Primitive Membraneless Polyester Microdroplets. Small Methods, 7, e2300119.
  4. Daerden, F., Crowley, J. N., Neary, L., Smith, M. D., Loeffler, M. J., Clancy, R. T., Wolff, M. J., Aoki, S., and Sagawa, H. (2023). Heterogeneous Processes in the Atmosphere of Mars and Impact on H2O2 and O3 Abundances. Journal of Geophysical Research: Planets, 128.
  5. Danielache, S. O., Iwama, G., Shinkai, M., Oinuma, M., Simoncini, E., and Grassi, T. (2023). Introducing atmospheric photochemical isotopic processes to the PATMO atmospheric code. Geochemical Journal, 57, 42-58.
  6. Gagrani, P., and Smith, E. (2023). Action functional gradient descent algorithm for estimating escape paths in stochastic chemical reaction networks. Phys Rev E, 107, 034305.
  7. Gilbert, A., Thomas, F., and Akoka, S. (2023). Position-Specific 13C Isotope Analysis by NMR as a Tool for Authentication of Ethanol-Containing Beverages. Handbook of Isotopologue Biogeochemistry；Springer-Nature Eds, 1-27.
  8. Kawagucci, S., Sakai, S., Tasumi, E., Hirai, M., Takaki, Y., Nunoura, T., Saitoh, M., Ueno, Y., Yoshida, N., Shibuya, T., Clifford Sample, J., Okumura, T., and Takai, K. (2023). Deep Subseafloor Biogeochemical Processes and Microbial Populations Potentially Associated with the 2011 Tohoku-oki Earthquake at the Japan Trench Accretionary Wedge (IODP Expedition 343). Microbes Environ, 38.
  9. Kitadai, N., Shibuya, T., Ueda, H., Tasumi, E., Okada, S., and Takai, K. (2023). Supercritical CO2 as the carbon source and reaction medium for methanethiol synthesis in primordial subseafloor. ChemRixiv.
  10. Kitadai, N., Shimamura, S., Takahagi, W., Miyazaki, M., Tasumi, E., and Okada, S. (2023). Elemental sulfur, hydrogen sulfide, and carbon monoxide-driven dimerization of glycine at sub-millimolar concentrations: Implications for the origin of life. Geochimica et Cosmochimica Acta, 349, 55-63.
  11. Li, Y., Kurokawa, H., Sekine, Y., Kebukawa, Y., Nakano, Y., Kitadai, N., Zhang, N., Zang, X., Ueno, Y., Fujimori, G., Nakamura, R., Fujishima, K., and Isa, J. (2023). Aqueous breakdown of aspartate and glutamate to n-omega-amino acids on the parent bodies of carbonaceous chondrites and asteroid Ryugu. Sci Adv, 9, eadh7845.
  12. Mahieux, A., Robert, S., Mills, F. P., Jessup, K. L., Trompet, L., Aoki, S., Piccialli, A., Peralta, J., and Vandaele, A. C. (2023). Update on SO2, detection of OCS, CS, CS2, and SO3, and upper limits of H2S and HOCl in the Venus mesosphere using SOIR on board Venus Express. Icarus, 399.
  13. Matsu’ura, F., Makita, H., Takai, K., Nakagawa, M., and Ueno, Y. (2023). Large sulfur isotope fractionation during abiotic consumption of hydrogen sulfide after cessation of bacterial growth in batch culture experiments of sulfate reducing bacteria. Earth and Planetary Science Letters, 624.
  14. Modak, A., López‐Valverde, M. A., Brines, A., Stolzenbach, A., Funke, B., González‐Galindo, F., Hill, B., Aoki, S., Thomas, I., Liuzzi, G., Villanueva, G., Erwin, J., Lopez Moreno, J. J., Yoshida, N., Grabowski, U., Forget, F., Daerden, F., Ristic, B., Bellucci, G., Patel, M., Trompet, L., and Vandaele, A. C. (2023). Retrieval of Martian Atmospheric CO Vertical Profiles From NOMAD Observations During the First Year of TGO Operations. Journal of Geophysical Research: Planets, 128.
  15. Nakamura, Y., Leblanc, F., Terada, N., Hiruba, S., Murata, I., Nakagawa, H., Sakai, S., Aoki, S., Piccialli, A., Willame, Y., Neary, L., Vandaele, A. C., Murase, K., and Kataoka, R. (2023). Numerical Prediction of Changes in Atmospheric Chemical Compositions During a Solar Energetic Particle Event on Mars. Journal of Geophysical Research: Space Physics, 128.
  16. Piccialli, A., Vandaele, A. C., Willame, Y., Määttänen, A., Trompet, L., Erwin, J. T., Daerden, F., Neary, L., Aoki, S., Viscardy, S., Thomas, I. R., Depiesse, C., Ristic, B., Mason, J. P., Patel, M. R., Wolff, M. J., Khayat, A. S. J., Bellucci, G., and Lopez‐Moreno, J. J. (2023). Martian Ozone Observed by TGO/NOMAD‐UVIS Solar Occultation: An Inter‐Comparison of Three Retrieval Methods. Earth and Space Science, 10.
  17. Saitoh, M., Nishizawa, M., Ozaki, K., Ikeda, M., Ueno, Y., Takai, K., andIsozaki, Y. (2023). Nitrogen Isotope Record From a Mid-oceanic Paleo-Atoll Limestone to Constrain the Redox State of the Panthalassa Ocean in the Capitanian (Late Guadalupian, Permian). Paleoceanography and Paleoclimatology, 38.
  18. Shimizu, Y., Tanimura, N., and Matsuura, T. (2023). ePURE_JSBML: A Tool for Constructing a Deterministic Model of a Reconstituted Escherichia coli Protein Translation System with a User-Specified Nucleic Acid Sequence. Adv Biol (Weinh), 7, e2200177.
  19. Smith, E. (2023). Beyond fitness: the nature of selection acting through the constructive steps of lifecycles. Evolution, 77, 1967–1986.
  20. Stolzenbach, A., López Valverde, M. A., Brines, A., Modak, A., Funke, B., González‐Galindo, F., Thomas, I., Liuzzi, G., Villanueva, G., Luginin, M., Aoki, S., Grabowski, U., Lopez Moreno, J. J., Rodrìguez Gòmez, J., Wolff, M., Ristic, B., Daerden, F., Bellucci, G., Patel, M., and Vandaele, A. C. (2023). Martian Atmospheric Aerosols Composition and Distribution Retrievals During the First Martian Year of NOMAD/TGO Solar Occultation Measurements: 1. Methodology and Application to the MY 34 Global Dust Storm. Journal of Geophysical Research: Planets, 128.
  21. Stolzenbach, A., López Valverde, M. A., Brines, A., Modak, A., Funke, B., González‐Galindo, F., Thomas, I., Liuzzi, G., Villanueva, G., Luginin, M., Aoki, S., Grabowski, U., Lopez Moreno, J. J., Rodriguez‐Gomez, J., Wolff, M., Ristic, B., Daerden, F., Bellucci, G., Patel, M., and Vandaele, A. C. (2023). Martian Atmospheric Aerosols Composition and Distribution Retrievals During the First Martian Year of NOMAD/TGO Solar Occultation Measurements: 2. Extended Results, End of MY 34 and First Half of MY 35. Journal of Geophysical Research: Planets, 128.
  22. Takahagi, W., Kitadai, N., Okada, S., Zhou, H., Takai, K., and Yamada, T. (2023). Quantification of Polysulfide Species in Aqueous Sulfur Thermocell. Chemistry Letters, 52, 197-201.
  23. Takahagi, W., Okada, S., Matsui, Y., Ono, S., Takai, K., Takahashi, Y., and Kitadai, N. (2023). Extreme accumulation of ammonia on electroreduced mackinawite: An abiotic ammonia storage mechanism in early ocean hydrothermal systems. Proc Natl Acad Sci U S A, 120, e2303302120.
  24. Trompet, L., Vandaele, A. C., Thomas, I., Aoki, S., Daerden, F., Erwin, J., Flimon, Z., Mahieux, A., Neary, L., Robert, S., Villanueva, G., Liuzzi, G., López‐Valverde, M. A., Brines, A., Bellucci, G., López‐Moreno, J. J., and Patel, M. R. (2023). Carbon Dioxide Retrievals From NOMAD‐SO on ESA’s ExoMars Trace Gas Orbiter and Temperature Profiles Retrievals With the Hydrostatic Equilibrium Equation: 1. Description of the Method. Journal of Geophysical Research: Planets, 128.
  25. Trompet, L., Vandaele, A. C., Thomas, I., Aoki, S., Daerden, F., Erwin, J., Flimon, Z., Mahieux, A., Neary, L., Robert, S., Villanueva, G., Liuzzi, G., López‐Valverde, M. A., Brines, A., Bellucci, G., Lopez‐Moreno, J. J., and Patel, M. R. (2023). Carbon Dioxide Retrievals From NOMAD‐SO on ESA’s ExoMars Trace Gas Orbiter and Temperature Profile Retrievals With the Hydrostatic Equilibrium Equation: 2. Temperature Variabilities in the Mesosphere at Mars Terminator. Journal of Geophysical Research: Planets, 128.
  26. Watanabe, Y., Tajika, E., and Ozaki, K. (2023). Evolution of iron and oxygen biogeochemical cycles during the Precambrian. Geobiology, 21, 689-707.
  27. Watanabe, Y., Tajika, E., and Ozaki, K. (2023). Biogeochemical transformations after the emergence of oxygenic photosynthesis and conditions for the first rise of atmospheric oxygen. Geobiology, 21, 537-555.
  28. Weiss, G. M., Sessions, A. L., Julien, M., Csernica, T., Yamada, K., Gilbert, A., Freeman, K. H., and Eiler, J. M. (2023). Analysis of intramolecular carbon isotope distributions in alanine by electrospray ionization Orbitrap mass spectrometry. International Journal of Mass Spectrometry, 493.
  29. Yada, T., Abe, M., Nishimura, M., Sawada, H., Okazaki, R., Takano, Y., Sakamoto, K., Okada, T., Nakato, A., Yoshitake, M., Nakano, Y., Yogata, K., Miyazaki, A., Furuya, S., Iwamae, A. S., Nakatsubo, S., Hatakeda, K., Hitomi, Y., Kumagai, K., Suzuki, S., Miura, Y. N., Ito, M., Tomioka, N., Uesugi, M., Karouji, Y., Uesugi, K., Shirai, N., Yamaguchi, A., Imae, N., Naraoka, H., Yamamoto, Y., Tachibana, S., Yurimoto, H., and Usui, T. (2023). A curation for uncontaminated Hayabusa2-returned samples in the extraterrestrial curation center of JAXA: from the beginning to present day. Earth, Planets and Space, 75.
  30. Yamaguchi, A., Arai, K., Aisnada, A. N. E., Ji-Eun, L., Kitadai, N., Nakamura, R., and Miyauchi, M. (2023). Design Strategy for CO2 Reduction Metal Sulfide Electrocatalysts Based on Multi-regression Analysis. Materia Japan, 62, 40-47.
  31. Yoshida, T., Aoki, S., Ueno, Y., Terada, N., Nakamura, Y., Shiobara, K., Yoshida, N., Nakagawa, H., Sakai, S., and Koyama, S. (2023). Strong Depletion of 13C in CO Induced by Photolysis of CO2 in the Martian Atmosphere, Calculated by a Photochemical Model The Planetary Science Journal, 4.

2022年

  1. Yoshida, T., Aoki, S., Ueno, Y., Terada, N., Nakamura, Y., Shiobara, K., Yoshida, N., Nakagawa, H., Sakai, S., Koyama, S., 2022. Strong depletion of 13C in CO induced by photolysis of CO2 in the Martian atmosphere calculated by a photochemical model. Planetary Science Journal 4. DOI:10.3847/PSJ/acc030
  2. Taguchi, K., Gilbert, A., Sherwood Lollar, B., Giunta, T., Boreham, C.J., Liu, Q., Horita, J., Ueno, Y., 2022. Low 13C-13C abundances in abiotic ethane. Nature Communications 13. DOI:10.1038/s41467-022-33538-9
  3. Kubota, Y., Matsu’ura, F., Shimizu, K., Ishikawa, A., Ueno, Y.,  2022. Sulfur in Archean komatiite implies early subduction of oceanic lithosphere. Earth and Planetary Science Letters 598. DOI:10.1016/j.epsl.2022.117826
  4. Igisu, M., Ueno, Y., Komiya, T., Awramik, S.M., Ikemoto, Y., Takai, K., 2022. Spatial distribution of organic functional groups in Ediacaran acritarchs from the Doushantuo Formation in South China as revealed by micro-FTIR spectroscopy.  Precambrian Research 373. DOI:10.1016/j.precamres.2022.106628
  5. Caruso, S., Fiorentini, M.L., Champion, D.C., Lu, Y., Ueno, Y., Smithies, R.H., 2022. Sulfur isotope systematics of granitoids from the Yilgarn Craton shed new light on the fluid reservoirs of Neoarchean orogenic gold deposits. Precambrian Research 326, 199-213. DOI:10.1016/j.gca.2022.03.023
  6. Igisu, M., Takahashi, Y., Uematsu, K., Takeichi, Y., Ueno, Y., Takai, K., 2022. STXM-XANES analyses of carbonaceous matter in seafloor hydrothermal deposits from the ~3.5 Ga Dresser Formation in the North Pole area, Western Australia. Geochemical Journal 56, 129-133. DOI:10.2343/geochemj.GJ22010
  7. Endo, Y., Sekine, Y., Ueno, Y., 2022. Sulfur mass-independent fractionation during SO2 photolysis in low-temperature/pressure atmospheres. Chemical Geology 609. DOI:10.1016/j.chemgeo.2022.121064
  8. Zang, X., Ueno, Y., Kitadai, N., 2022. Photochemical synthesis of ammonia and amino acids from nitrous oxide. Astrobiology 22, 387-398. DOI:10.1089/ast.2021.0064
  9. Eric Smith , 2022. The information geometry of two-field functional integrals. Information Geometry 5, 427-492. DOI:10.1007/s41884-022-00071-z
  10. Kitadai N., Okada S., Makabe A., Tasumi E., Miyazaki M., 2022. Polysulfide-assisted urea synthesis from carbon monoxide and ammonia in water. PeerJ Organic Chemistry 4, e6. DOI:10.7717/peerj-ochem.6
  11. 北台紀夫, 2022. 生命起源のケミストリーは地球のハビタビリティーの存続に寄与できるか？Viva Origino 50, 4. DOI:10.50968/vivaorigino.50_4
  12. Julien M., Zhao Y., Ma R., Zhou Y.P., Nakagawa M., Yamada K., Yoshida N., Remaud G.S., Gilbert A. 2022. Re-evaluation of the 13C isotope fractionation associated with lipids biosynthesis by position-specific isotope analysis of plant fatty acids. Organic Geochemistry 174, 104516. 10.1016/j.orggeochem.2022.104516
  13. Broadley M. W., K. Yamada, et al., 2022. The noble gas and nitrogen relationship between Ryugu and carbonaceous chondrites. Geochimica et Cosmochimica Acta 345, 62-7. 10.1016/j.gca.2023.01.020
  14. Okazaki R. K. Yamada, et al., 2022. First asteroid gas sample delivered by the Hayabusa2 mission: A treasure box from Ryugu. Science Advances 8, 2375-2548. 10.1126/sciadv.abo7239
  15. Miura Y.N., Okazaki R., Takano Y., Sakamoto K., Tachibana S., Yamada K., Sakai s., Sawada H. 2022. The GAs Extraction and Analyse system (GAEA) for immediate extraction and measurements of volatiles in the Hayabusa2 sample container. Earth, Planets and Space 74. 10.1186/s40623-022-01638-x
  16. Kudo K., Toyoda S., Yamada K., Yoshida N. Sasano D., Kosugi N., Muata A., Uchida H., Nishino S., 2022. Source analysis of dissolved methane in Chukchi Sea and Bering Strait during summer-autumn of 2012 and 2013. Marine Chemistry 243. 10.1016/j.marchem.2022.104119
  17. A. Gilbert, Mayuko Nakagawa, Koudai Taguchi, Naizhong Zhang, Akifumi Nishida, Naohiro Yoshida, 2022. Hydrocarbon Cycling in the Tokamachi Mud Volcano (Japan): Insights from Isotopologue and Metataxonomic Analyses. Microorganisms 7, 1417. 10.3390/microorganisms10071417
  18. A. Brines, M. A. Lopez‐Valverde, A. Stolzenbach, A. Modak, B. Funke, F. G. Galindo, S. Aoki, G. L. Villanueva, G. Liuzzi, I. R. Thomas, J. T. Erwin, U. Grabowski, F. Forget, J. J. Lopez‐Moreno, J. Rodriguez‐Gomez, F. Daerden, L. Trompet, B. Ristic, M. R. Patel, G. Bellucci, A. C. Vandaele, 2022. Water vapor vertical distribution on Mars during perihelion season of MY 34 and MY 35 with ExoMars‐TGO/NOMAD observations. Journal of Geophysical Research: Planets 128, 3. e2022JE007273. doi.org/10.1029/2022je007273
  19. Miguel‐Angel Lopez Valverde, Shohei Aoki, et al. 2022. Martian atmospheric temperature and density profiles during the 1st year of NOMAD/TGO solar occultation measurements. Journal of Geophysical Research: Planets 128, 2. e2022JE007278. doi.org/10.1029/2022je007278
  20. J. A. Holmes, S. R. Lewis, M. R. Patel, J. Alday, S. Aoki, G. Liuzzi, G. L. Villanueva, M. M. J. Crismani, A. A. Fedorova, K. S. Olsen, D. M. Kass, A. C. Vandaele, O. Korablev, 2022. Global variations in water vapour and saturation state throughout the Mars Year 34 dusty season. Journal of Geophysical Research: Planets 127, 10. e2022JE007203. doi.org/10.1029/2022je007203
  21. S. Aoki, A. C. Vandaele, F. Daerden, G. L. Villanueva, G. Liuzzi, R. T. Clancy, M. A. Lopez‐Valverde, A. Brines, I. R. Thomas, L. Trompet, J. T. Erwin, L. Neary, S. Robert, A. Piccialli, J. A. Holmes, M. R. Patel, N. Yoshida, J. Whiteway, M. D. Smith, B. Ristic, G. Bellucci, J. J. Lopez‐Moreno, A. A. Fedorova, 2022. Global vertical distribution of water vapor on Mars: Results from 3.5 years of ExoMars‐TGO/NOMAD science operations. Journal of Geophysical Research: Planets 127, 9. e2022JE007231. doi.org/10.1029/2022je007231
  22. F. Daerden, S. Aoki, et al., 2022. Planet‐Wide Ozone Destruction in the Middle Atmosphere on Mars During Global Dust Storm. Geophysical Research Letters 49 (11), e2022GL098821. doi.org/10.1029/2022gl098821
  23. Geronimo L. Villanueva, Shohei Aoki, et al., 2022. The deuterium isotopic ratio of water released from the Martian caps as measured with TGO/NOMAD. Geophysical Research Letters 49 (12). e2022GL098161. doi.org/10.1029/2022gl098161
  24. Nao Yoshida, Shohei Aoki, et al., 2022. Variations in Vertical CO/CO2 Profiles in the Martian Mesosphere and Lower Thermosphere Measured by the ExoMars TGO/NOMAD: Implications of Variations in Eddy Diffusion Coefficient. Geophysical Research Letters 49 (10), e2022GL098485. doi.org/10.1029/2022GL098485
  25. S. Aoki, L. Gkouvelis, J.‐C. Gerard, L. Soret, B. Hubert, M. A. Lopez‐Valverde, F. Gonzalez‐Galindo, H. Sagawa, I. R. Thomas, B. Ristic, Y. Willame, C. Depiesse, J. Mason, M. R. Patel, G. Bellucci, J.‐J. Lopez‐Moreno, F. Daerden, A. C. Vandaele, 2022. Density and temperature of the upper mesosphere and lower thermosphere of Mars retrieved from the OI 557.7 nm dayglow measured by TGO/NOMAD. Journal of Geophysical Research: Planets 127, 6. e2022JE007206. doi.org/10.1029/2022JE007206
  26. L. Soret, J.‐C. Gerard, S. Aoki, L. Gkouvelis, I. R. Thomas, B. Ristic, B. Hubert, Y. Willame, C. Depiesse, A.C. Vandaele, M. R. Patel, J. P. Mason, F. Daerden, J.‐J. Lopez‐Moreno, G. Bellucci, 2022. The Mars oxygen visible dayglow: A MARTIAN YEAR OF NOMAD/UVIS OBSERVATIONS. Journal of Geophysical Research: Planets 127, 6. e2022JE007220. doi.org/10.1029/2022JE007220
  27. 尾﨑和海, 2022. 光合成の進化が地球環境へ及ぼした影響. 光合成研究 32, 140-150.
  28. Masahiro Yamamoto, Yoshihiro Takaki, Hiroyuki Kashima, Miwako Tsuda, Akiko Tanizaki, Ryuhei Nakamura , Ken Takai, 2022. In situ electrosynthetic bacterial growth using electricity generated by a deep-sea hydrothermal vent. ISME Journal 17, 12-20. 10.1038/s41396-022-01316-6
  29. Yamei Li, Norio Kitadai, Yasuhito Sekine, Hiroyuki Kurokawa, Yuko Nakano, Kristin Johnson-Finn, 2022. Geoelectrochemistry-driven alteration of amino acids to derivative organics in carbonaceous chondrite parent bodies. Nature Communications 13, 4893. 10.1038/s41467-022-32596-3

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